Yes. Like a lot of things about Jason, it was just more complicated and difficult than Bruce was able to deal with. Dick really was able to get what he needed out of being Robin and living with Bruce, but Jason was coming from a totally different background. One that maybe Bruce overreached by thinking he understood, in fact. Bruce is a pretty dark guy, but he didn't grow up in Jason's environment any more than Dick did. But Bruce didn't really seem to see a way to deal with things better--and taking Robin away would definitely have caused huge problems too.