I don't know. It might turn out that way I suppose, but I thought they set up a pretty clear chain of events - victor choosing the weird music that was part of some hi-tech signal, the missile going on a homing beacon, and suddenly veering off course to the place where the music was playing.
Now, if the Big Bad is this "Hunter Stein" character, and lets say that means he's from the Future (all guesses of course, but at least plausible), he might have known it was going to happen, but it doesn't look like it was anything he specifically planned, and the targets he referred to could easily be something else.